R-chie [ɑrči]
A web server and R package for plotting RNA secondary structures, trans RNA-RNA interactions and genomic interactions.
EXAMPLE LOADED: Click Plot to see webserver in action, or Reset to submit own input.

Secondary Structure Input

Paste a secondary structure in dot-bracket, connect, bpseq, helix, new helix, or new genome interaction file format.
(Click format names for example, hover on names for format details)

OR Upload a file:

Input Processing Options

Sort basepairs by value in order  Help icon
Filter out basepairs with values: < and > Help icon

Appearance Options

No. of Groups Colour Palette Grouping Rule
 Help icon  Help icon  Help icon
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No Scale Help icon No Legend Help icon

Please select shape:



(Optional) Your e-mail for job completion notice:

Add another structure to plot

Add nucleotide sequence(s) to plot

Add Second nucleotide sequence(s) to plot