e-RNA
Brought to you by the Meyer Lab @ MDC Berlin

A collection of electronic tools to help you find your way in the RNA world

× Disclaimer! Any plots that have been on our servers for a month or more are automatically deleted.

Cluster Usage

Cluster Info

Check useful information related to our cluster...(Coming soon).

Visualization (Web Server)

R-chie & R4RNA

Visualize RNA secondary structures as arc diagrams >> Cite

Secondary Structure Prediction (Web Servers)

Transat

Detect evolutionarily conserved features from homologue alignments >> Cite

Simulfold

Simultaneous co-estimation of RNA structure, multiple sequence alignment, and evolutionary tree >> Cite

RNA-Decoder

Detecting conserved RNA secondary-structure overlapping protein-coding RNA sequences >> Cite & Cite

CoFold

Thermodynamic RNA secondary-structure prediction that takes co-transcriptional folding into account >> Cite

CoBold

(Coming soon...) >> Cite

Circular RNAs

BIQ

Search transcriptome sequencing datasets for circular RNAs, example datasets >> Cite

Comparative Prediction of Protein-Coding Genes (External Links)

HMMConverter

A software toolbox for Hidden Markov Models >> Cite

Doublescan

Comparative, alignment-free, ab-initio gene prediction >> Cite

Projector

Comparative, alignment free gene prediction >> Cite